6ROL Rna Binding Protein date May 13, 2019
title Structure Of Imp2 Kh34 Domains
authors V.Bhaskar, J.Biswas, R.H.Singer, J.A.Chao
compound source
Molecule: Insulin-Like Growth Factor 2 Mrna-Binding Protein
Chain: A, B, C, D
Synonym: Imp-2,Hepatocellular Carcinoma Autoantigen P62,Igf Binding Protein 2,Vickz Family Member 2;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Igf2bp2, Imp2, Vickz2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.198 R_Free 0.224
crystal
cell
length a length b length c angle alpha angle beta angle gamma
76.880 62.380 85.740 90.00 91.32 90.00
method X-Ray Diffractionresolution 2.10 Å
ligand GOL, PEG, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (219 Kb) [Save to disk]
  • Biological Unit Coordinates (6rol.pdb1.gz) 58 Kb
  • Biological Unit Coordinates (6rol.pdb2.gz) 52 Kb
  • Biological Unit Coordinates (6rol.pdb3.gz) 58 Kb
  • Biological Unit Coordinates (6rol.pdb4.gz) 52 Kb
  • LPC: Ligand-Protein Contacts for 6ROL
  • CSU: Contacts of Structural Units for 6ROL
  • Structure Factors (1029 Kb)
  • Retrieve 6ROL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6ROL from S2C, [Save to disk]
  • View 6ROL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6ROL
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6rol from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6rol_B] [6rol_C] [6rol_D] [6rol_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6ROL
  • Community annotation for 6ROL at PDBWiki (http://pdbwiki.org)

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