6VDB		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	SAH, SCN, UNX, ZN	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Sequence specificity analysis of the SETD2 protein lysine methyltransferase and discovery of a SETD2 super-substrate., Schuhmacher MK, Beldar S, Khella MS, Brohm A, Ludwig J, Tempel W, Weirich S, Min J, Jeltsch A, Commun Biol. 2020 Sep 16;3(1):511. doi: 10.1038/s42003-020-01223-6. PMID:32939018

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (47 Kb) [Save to disk] Biological Unit Coordinates (6vdb.pdb1.gz) 41 Kb LPC: Ligand-Protein Contacts for 6VDB CSU: Contacts of Structural Units for 6VDB Structure Factors (3886 Kb) Retrieve 6VDB in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6VDB from S2C, [Save to disk]

View 6VDB in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6vdb_A] [6vdb_H] SWISS-PROT database:

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