6VPB date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand IPA, MG, PEG enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceThe structure of a novel membrane-associated 6-phosphogluconate dehydrogenase from Gluconacetobacter diazotrophicus (Gd6PGD) reveals a subfamily of short-chain 6PGDs., Sarmiento-Pavia PD, Rodriguez-Hernandez A, Rodriguez-Romero A, Sosa-Torres ME, FEBS J. 2020 Jul 4. doi: 10.1111/febs.15472. PMID:32621793
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (107 Kb) [Save to disk]
  • Biological Unit Coordinates (6vpb.pdb1.gz) 200 Kb
  • LPC: Ligand-Protein Contacts for 6VPB
  • CSU: Contacts of Structural Units for 6VPB
  • Structure Factors (1298 Kb)
  • Retrieve 6VPB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6VPB from S2C, [Save to disk]
  • View 6VPB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6vpb_A] [6vpb_B]
  • SWISS-PROT database:

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