6XPF Transport Protein date Jul 08, 2020
title Cryo-Em Structure Of Human Znt8 Wt, In The Absence Of Zinc, In Heterogeneous Conformations- One Subunit In An Inward-Fa The Other In An Outward-Facing Conformation
authors X.C.Bai, J.Xue, Y.X.Jiang
compound source
Molecule: Zinc Transporter 8
Chain: A, B
Synonym: Znt-8,Solute Carrier Family 30 Member 8
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Cell_line: Hek293
Gene: Slc30a8, Znt8
Expression_system: Homo Sapiens
Expression_system_common: Human
Expression_system_taxid: 9606
Expression_system_cell_line: Hek293
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 5.90 Å
ligand ZN enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (51 Kb) [Save to disk]
  • Biological Unit Coordinates (6xpf.pdb1.gz) 45 Kb
  • LPC: Ligand-Protein Contacts for 6XPF
  • CSU: Contacts of Structural Units for 6XPF
  • Retrieve 6XPF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6XPF from S2C, [Save to disk]
  • View 6XPF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6XPF
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6xpf from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6xpf_A] [6xpf_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6XPF
  • Community annotation for 6XPF at PDBWiki (http://pdbwiki.org)

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