6YPE date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CA, CAC enzyme
Primary referenceA synthetic synaptic organizer protein restores glutamatergic neuronal circuits., Suzuki K, Elegheert J, Song I, Sasakura H, Senkov O, Matsuda K, Kakegawa W, Clayton AJ, Chang VT, Ferrer-Ferrer M, Miura E, Kaushik R, Ikeno M, Morioka Y, Takeuchi Y, Shimada T, Otsuka S, Stoyanov S, Watanabe M, Takeuchi K, Dityatev A, Aricescu AR, Yuzaki M, Science. 2020 Aug 28;369(6507). pii: 369/6507/eabb4853. doi:, 10.1126/science.abb4853. PMID:32855309
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (145 Kb) [Save to disk]
  • Biological Unit Coordinates (6ype.pdb1.gz) 71 Kb
  • Biological Unit Coordinates (6ype.pdb2.gz) 69 Kb
  • LPC: Ligand-Protein Contacts for 6YPE
  • CSU: Contacts of Structural Units for 6YPE
  • Structure Factors (2220 Kb)
  • Retrieve 6YPE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6YPE from S2C, [Save to disk]
    • View 6YPE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6ype_A] [6ype_B]
  • SWISS-PROT database:

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