1EVU	Transferase	date	Apr 20, 2000
title	Human Factor Xiii With Calcium Bound In The Ion Site
authors	R.J.Garzon, K.P.Pratt, P.D.Bishop, I.Le Trong, R.E.Stenkamp, D.C.Teller
compound		source
Molecule: Coagulation Factor Xiii Chain: A, B Ec: 2.3.2.13 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Saccharomyces Cerevisiae Expression_system_common: Baker'S Yeast Expression_system_taxid: 4932 Expression_system_strain: Zm118
symmetry	Space Group: P 1 21 1	R_factor 0.208 R_Free 0.266
crystal cell	length a length b length c angle alpha angle beta angle gamma 100.172 70.764 133.822 90.00 106.11 90.00
method	X-Ray Diffraction	resolution	2.01 Å
ligand	CA, PGO, SAC	enzyme	Transferase E.C.2.3.2.13 BRENDA
related structures	by homologous chain: 1EX0, 1F13
Gene Ontology	Chain Function Process Component A, B

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (260 Kb) [Save to disk] Biological Unit Coordinates (1evu.pdb1.gz) 253 Kb LPC: Ligand-Protein Contacts for 1EVU CSU: Contacts of Structural Units for 1EVU Likely Quarternary Molecular Structure file(s) for 1EVU Structure Factors (850 Kb) Retrieve 1EVU in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1EVU from S2C, [Save to disk] Re-refined 1evu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1EVU in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1EVU

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1EVU, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1evua1, region A:1-190 [Jmol] [rasmolscript] [script source]     - Domain d1evua4, region A:191-508 [Jmol] [rasmolscript] [script source]     - Domain d1evua2, region A:516-627 [Jmol] [rasmolscript] [script source]     - Domain d1evua3, region A:628-727 [Jmol] [rasmolscript] [script source]     - Domain d1evub4, region B:191-508 [Jmol] [rasmolscript] [script source]     - Domain d1evub2, region B:515-627 [Jmol] [rasmolscript] [script source]     - Domain d1evub3, region B:628-727 [Jmol] [rasmolscript] [script source]     - Domain d1evub1, region B:8-190 [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1evu_A] [1evu] [1evu_B] SWISS-PROT database: [P00488] Domain organization of [F13A_HUMAN] by SWISSPFAM Domain found in 1EVU: [TGc ] by SMART

Other resources with information on 1EVU

Community annotation for 1EVU at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

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