1JGP date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 1MA, 2MG, 4SU, 5MC, 5MU, 7MG, H2U, M2G, OMC, OMG, PSU, YG enzyme
Gene
Ontology
ChainFunctionProcessComponent
E


F


G


H


I


J


K


L


M


N


O


P


Q


R


S


T


U


V


W


X


Primary referenceThe path of messenger RNA through the ribosome., Yusupova GZ, Yusupov MM, Cate JH, Noller HF, Cell 2001 Jul 27;106(2):233-41. PMID:11511350
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (169 Kb) [Save to disk]
  • Biological Unit Coordinates (1jgp.pdb1.gz) 159 Kb
  • LPC: Ligand-Protein Contacts for 1JGP
  • CSU: Contacts of Structural Units for 1JGP
  • Likely Quarternary Molecular Structure file(s) for 1JGP
  • Retrieve 1JGP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1JGP from S2C, [Save to disk]
    • View 1JGP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1jgp] [1jgp_1] [1jgp_A] [1jgp_B] [1jgp_C] [1jgp_D] [1jgp_E] [1jgp_F] [1jgp_G] [1jgp_H] [1jgp_I] [1jgp_J] [1jgp_K] [1jgp_L] [1jgp_M] [1jgp_N] [1jgp_O] [1jgp_P] [1jgp_Q] [1jgp_R] [1jgp_S] [1jgp_T] [1jgp_U] [1jgp_V] [1jgp_W] [1jgp_X]
  • SWISS-PROT database: [Q5SHN7] [P80376] [Q5SHN3] [P80377] [Q5SHQ1] [Q5SJ76] [Q5SJH3] [Q5SHP7] [Q5SLQ0] [Q5SHP2] [P80380] [P80371] [P80373] [Q5SHQ5] [Q5SLP8] [P17291] [Q5SHQ2] [P80374] [Q5SIH3]
  • Domains found in 1JGP: [KH] [Ribosomal_S10] [Ribosomal_S15] [Ribosomal_S4] [S4 ] by SMART

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