1K3X | Hydrolase Dna | date | Oct 04, 2001 |
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title | Crystal Structure Of A Trapped Reaction Intermediate Of The Enzyme Endonuclease Viii With Brominated-Dna | ||||||||||||||
authors | G.Golan, D.O.Zharkov, R.Gilboa, A.S.Fernandes, J.H.Kycia, S.E.Ger R.A.Rieger, A.P.Grollman, G.Shoham | ||||||||||||||
compound | source | ||||||||||||||
Molecule: 5'-D(Gpgpcp(Bru)P(Bru)Pcpap(Bru)Pcpcp( Pgpg)-3'; Chain: B Engineered: Yes |
Synthetic: Yes | ||||||||||||||
Molecule: 5'-D(Cpcpapgpgpap(Ped)Pgpapapgpcpc)- Chain: C Engineered: Yes |
Synthetic: Yes | ||||||||||||||
Molecule: Endonuclease Viii Chain: A Ec: 3.2.2.- Engineered: Yes |
Organism_scientific: Escherichia Coli Organism_taxid: 562 Gene: Nei Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid | ||||||||||||||
symmetry | Space Group: P 43 2 2 |
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crystal cell |
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method | X-Ray Diffraction | resolution | 1.25 Å | ||||||||||||
ligand | BRU, GOL, PED, SO4, ZN | enzyme | Hydrolase E.C.3.2.2 BRENDA | ||||||||||||
note | 1K3X is a representative structure | ||||||||||||||
related structures | by homologous chain: 1K3W | ||||||||||||||
Gene Ontology |
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Primary reference | Structural analysis of an Escherichia coli endonuclease VIII covalent reaction intermediate., Zharkov DO, Golan G, Gilboa R, Fernandes AS, Gerchman SE, Kycia JH, Rieger RA, Grollman AP, Shoham G, EMBO J 2002 Feb 15;21(4):789-800. PMID:11847126 |
Data retrieval |
View 1K3X in 3D |
Visual 3D analysis of 1K3X |
Structure-derived information |
- Domain d1k3xa2, region A:1-124 [Jmol] [rasmolscript] [script source] - Domain d1k3xa1, region A:125-213 [Jmol] [rasmolscript] [script source] - Domain d1k3xa3, region A:223-262 [Jmol] [rasmolscript] [script source] |
Sequence-derived information |
Other resources with information on 1K3X |
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OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science |