3B07 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MPD enzyme
Gene
Ontology
ChainFunctionProcessComponent
D, F, B, H
  • toxin activity


    • E, A, G, C


    Primary referenceCrystal structure of the octameric pore of staphylococcal gamma-hemolysin reveals the beta-barrel pore formation mechanism by two components., Yamashita K, Kawai Y, Tanaka Y, Hirano N, Kaneko J, Tomita N, Ohta M, Kamio Y, Yao M, Tanaka I, Proc Natl Acad Sci U S A. 2011 Oct 18;108(42):17314-9. Epub 2011 Oct 3. PMID:21969538
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (374 Kb) [Save to disk]
  • Biological Unit Coordinates (3b07.pdb1.gz) 368 Kb
  • LPC: Ligand-Protein Contacts for 3B07
  • CSU: Contacts of Structural Units for 3B07
  • Structure Factors (2207 Kb)
  • Retrieve 3B07 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3B07 from S2C, [Save to disk]
  • Re-refined 3b07 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3B07 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3b07] [3b07_A] [3b07_B] [3b07_C] [3b07_D] [3b07_E] [3b07_F] [3b07_G] [3b07_H]
  • SWISS-PROT database:

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