3QYY date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand C2E, MG, PEG enzyme
Primary referenceThe structure and inhibition of a GGDEF diguanylate cyclase complexed with (c-di-GMP)(2) at the active site., Yang CY, Chin KH, Chuah ML, Liang ZX, Wang AH, Chou SH, Acta Crystallogr D Biol Crystallogr. 2011 Dec;67(Pt 12):997-1008. Epub 2011 Nov, 18. PMID:22120736
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (60 Kb) [Save to disk]
  • Biological Unit Coordinates (3qyy.pdb1.gz) 55 Kb
  • LPC: Ligand-Protein Contacts for 3QYY
  • CSU: Contacts of Structural Units for 3QYY
  • Structure Factors (322 Kb)
  • Retrieve 3QYY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3QYY from S2C, [Save to disk]
  • Re-refined 3qyy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3QYY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3qyy] [3qyy_A] [3qyy_B]
  • SWISS-PROT database:
  • Domain found in 3QYY: [GGDEF ] by SMART

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