4ALD Lyase date Jul 26, 1998
title Human Muscle Fructose 1,6-Bisphosphate Aldolase Complexed Wi Fructose 1,6-Bisphosphate
authors A.R.Dalby, Z.Dauter, J.A.Littlechild
compound source
Molecule: Fructose-Bisphosphate Aldolase
Chain: A
Other_details: Hydrogen Bonded Complex To Fructose 1,6-Bisp
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Organ: Skeletal
Tissue: Muscle
Other_details: Leg Tissue
symmetry Space Group: P 64 2 2
R_factor 0.202 R_Free 0.304
length a length b length c angle alpha angle beta angle gamma
96.500 96.500 166.900 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.80 Å
ligand 2FP enzyme Lyase E.C. BRENDA
note 4ALD (Molecule of the Month:pdb50)
related structures by homologous chain: 1J4E, 1XFB

Primary referenceCrystal structure of human muscle aldolase complexed with fructose 1,6-bisphosphate: mechanistic implications., Dalby A, Dauter Z, Littlechild JA, Protein Sci 1999 Feb;8(2):291-7. PMID:10048322
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (58 Kb) [Save to disk]
  • Biological Unit Coordinates (4ald.pdb1.gz) 205 Kb
  • LPC: Ligand-Protein Contacts for 4ALD
  • CSU: Contacts of Structural Units for 4ALD
  • Likely Quarternary Molecular Structure file(s) for 4ALD
  • Retrieve 4ALD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4ALD from S2C, [Save to disk]
  • View 4ALD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4ALD
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4ALD, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d4ald__, region [Jmol] [rasmolscript] [script source]
  • Fold representative 4ald from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ald_A] [4ald]
  • SWISS-PROT database: [P04075]
  • Domain organization of [ALDOA_HUMAN] by SWISSPFAM
  • Other resources with information on 4ALD
  • Community annotation for 4ALD at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 4ALD from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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