4BDV	Blood Clotting	date	Oct 08, 2012
title	Crystal Structure Of A Truncated B-Domain Human Factor Viii
authors	L.A.Svensson, L.Thim, O.H.Olsen, E.M.Nicolaisen
compound		source
Molecule: Factor Viiia Heavy Chain, 92 Kda Isoform, B Domai Chain: A Fragment: Coagulation Factor Viii, Residues 20-769,1657-166 Synonym: Coagulation Factor Viii, Antihemophilic Factor, Ah Procoagulant Component; Engineered: Yes Other_details: The Fviii B-Domain Has Been Replaced With A 21 Amino Acid Long, B-Domain Variant.;		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Organ: Blood Expression_system: Cricetulus Griseus Expression_system_common: Chinese Hamster Expression_system_taxid: 10029 Expression_system_cell_line: Cho
Molecule: Factor Viiia Light Chain Chain: B Fragment: Residues 1667-2351 Synonym: Coagulation Factor Viii, Antihemophilic Factor, Ah Procoagulant Component; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Organ: Blood Expression_system: Cricetulus Griseus Expression_system_common: Chinese Hamster Expression_system_taxid: 10029 Expression_system_cell_line: Cho
symmetry	Space Group: P 41 21 2	R_factor 0.162 R_Free 0.246
crystal cell	length a length b length c angle alpha angle beta angle gamma 133.840 133.840 355.810 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	3.98 Å
ligand	BMA, CA, CU1, EDO, NAG, ZN	enzyme
Gene Ontology	Chain Function Process Component A B
Primary reference	Evaluation of the metal binding sites in a recombinant coagulation factor VIII identifies two sites with unique metal binding properties., Svensson LA, Thim L, Olsen OH, Nicolaisen EM, Biol Chem. 2013 Jun 1;394(6):761-5. doi: 10.1515/hsz-2012-0298. PMID:23435097

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (439 Kb) [Save to disk] Biological Unit Coordinates (4bdv.pdb1.gz) 430 Kb LPC: Ligand-Protein Contacts for 4BDV CSU: Contacts of Structural Units for 4BDV Structure Factors (623 Kb) Retrieve 4BDV in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4BDV from S2C, [Save to disk] Re-refined 4bdv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4BDV in 3D

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Visual 3D analysis of 4BDV

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4BDV, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4bdv] [4bdv_B] [4bdv_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 4BDV: [FA58C ] by SMART

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