4H1V GMP-PNP bound dynamin-1-like protein GTPase-GED fusion date
authors Wenger, J., Klinglmayr, E., Eibl, C., Hessenberger, M., Goettig, P.
compound source
symmetry
R_factor
R_Free 0.2777
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.30
ligand GNP enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceFunctional Mapping of Human Dynamin-1-Like GTPase Domain Based on X-ray Structure Analyses., Wenger J, Klinglmayr E, Frohlich C, Eibl C, Gimeno A, Hessenberger M, Puehringer S, Daumke O, Goettig P, PLoS One. 2013 Aug 19;8(8):e71835. doi: 10.1371/journal.pone.0071835. PMID:23977156
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (64 Kb) [Save to disk]
  • Biological Unit Coordinates (4h1v.pdb1.gz) 59 Kb
  • LPC: Ligand-Protein Contacts for 4H1V
  • CSU: Contacts of Structural Units for 4H1V
  • Structure Factors (119 Kb)
  • Retrieve 4H1V in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4H1V from S2C, [Save to disk]
  • Re-refined 4h1v structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4H1V in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4H1V
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4H1V, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4h1v_A] [4h1v]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4H1V: [DYNc ] by SMART
  • Other resources with information on 4H1V
  • Community annotation for 4H1V at PDBWiki (http://pdbwiki.org)

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