OCA Atlas for 5CZV

5CZV

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

CA, NAG

enzyme

Gene
Ontology

Chain	Function	Process	Component
A

Primary reference

Characterization of activating mutations of NOTCH3 in T-cell acute lymphoblastic leukemia and anti-leukemic activity of NOTCH3 inhibitory antibodies., Bernasconi-Elias P, Hu T, Jenkins D, Firestone B, Gans S, Kurth E, Capodieci P, Deplazes-Lauber J, Petropoulos K, Thiel P, Ponsel D, Hee Choi S, LeMotte P, London A, Goetcshkes M, Nolin E, Jones MD, Slocum K, Kluk MJ, Weinstock DM, Christodoulou A, Weinberg O, Jaehrling J, Ettenberg SA, Buckler A, Blacklow SC, Aster JC, Fryer CJ, Oncogene. 2016 May 9. doi: 10.1038/onc.2016.133. PMID:27157619

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (214 Kb) [Save to disk]

Biological Unit Coordinates (5czv.pdb1.gz) 208 Kb

LPC: Ligand-Protein Contacts for 5CZV

CSU: Contacts of Structural Units for 5CZV

Structure Factors (205 Kb)

Retrieve 5CZV in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 5CZV from S2C, [Save to disk]

Re-refined 5czv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5CZV in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5czv] [5czv_A] [5czv_H] [5czv_L]

SWISS-PROT database:

Domains found in 5CZV: [IG_like] [IGv] [NL] [NOD] [NODP ] by SMART

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