5M5E date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CYS, FUC, MAN, NAG, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, C


D


Primary referenceCergutuzumab amunaleukin (CEA-IL2v), a CEA-targeted IL-2 variant-based immunocytokine for combination cancer immunotherapy: Overcoming limitations of aldesleukin and conventional IL-2-based immunocytokines., Klein C, Waldhauer I, Nicolini VG, Freimoser-Grundschober A, Nayak T, Vugts DJ, Dunn C, Bolijn M, Benz J, Stihle M, Lang S, Roemmele M, Hofer T, van Puijenbroek E, Wittig D, Moser S, Ast O, Brunker P, Gorr IH, Neumann S, de Vera Mudry MC, Hinton H, Crameri F, Saro J, Evers S, Gerdes C, Bacac M, van Dongen G, Moessner E, Umana P, Oncoimmunology. 2017 Jan 11;6(3):e1277306. doi: 10.1080/2162402X.2016.1277306., eCollection 2017. PMID:28405498
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (193 Kb) [Save to disk]
  • Biological Unit Coordinates (5m5e.pdb1.gz) 185 Kb
  • LPC: Ligand-Protein Contacts for 5M5E
  • CSU: Contacts of Structural Units for 5M5E
  • Structure Factors (3988 Kb)
  • Retrieve 5M5E in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5M5E from S2C, [Save to disk]
  • Re-refined 5m5e structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5M5E in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5m5e] [5m5e_B] [5m5e_C] [5m5e_D]
  • SWISS-PROT database:

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