5V8M		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	BMA, MAN, NAG	enzyme
Gene Ontology	Chain Function Process Component B, I, J F, A, G
Primary reference	A Broadly Neutralizing Antibody Targets the Dynamic HIV Envelope Trimer Apex via a Long, Rigidified, and Anionic beta-Hairpin Structure., Lee JH, Andrabi R, Su CY, Yasmeen A, Julien JP, Kong L, Wu NC, McBride R, Sok D, Pauthner M, Cottrell CA, Nieusma T, Blattner C, Paulson JC, Klasse PJ, Wilson IA, Burton DR, Ward AB, Immunity. 2017 Apr 18;46(4):690-702. doi: 10.1016/j.immuni.2017.03.017. PMID:28423342

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (432 Kb) [Save to disk] Biological Unit Coordinates (5v8m.pdb1.gz) 410 Kb LPC: Ligand-Protein Contacts for 5V8M CSU: Contacts of Structural Units for 5V8M Retrieve 5V8M in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5V8M from S2C, [Save to disk]

View 5V8M in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5v8m] [5v8m_A] [5v8m_B] [5v8m_F] [5v8m_G] [5v8m_H] [5v8m_I] [5v8m_J] [5v8m_L] [5v8m_R] [5v8m_S] [5v8m_T] [5v8m_U] SWISS-PROT database:

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