1D0N	Contractile Protein	date	Sep 13, 1999
title	The Crystal Structure Of Calcium-Free Equine Plasma Gelsolin
authors	L.D.Burtnick, R.Robinson, C.Li
compound		source
Molecule: Horse Plasma Gelsolin Chain: A, B		Organism_scientific: Equus Caballus Organism_common: Horse Organism_taxid: 9796 Tissue: Plasma
symmetry	Space Group: P 4 21 2	R_factor 0.205 R_Free 0.238
crystal cell	length a length b length c angle alpha angle beta angle gamma 169.400 169.400 154.200 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.50 Å
related structures	by homologous chain: 1C0F, 1H1V, 1P8Z
Gene Ontology	Chain Function Process Component A, B
Primary reference	The crystal structure of plasma gelsolin: implications for actin severing, capping, and nucleation., Burtnick LD, Koepf EK, Grimes J, Jones EY, Stuart DI, McLaughlin PJ, Robinson RC, Cell 1997 Aug 22;90(4):661-70. PMID:9288746

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (240 Kb) [Save to disk] Biological Unit Coordinates (1d0n.pdb1.gz) 236 Kb Biological Unit Coordinates (1d0n.pdb2.gz) 931 Kb CSU: Contacts of Structural Units for 1D0N Likely Quarternary Molecular Structure file(s) for 1D0N Structure Factors (639 Kb) Retrieve 1D0N in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1D0N from S2C, [Save to disk] Re-refined 1d0n structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1D0N in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1D0N

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1D0N, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1d0na2, region A:153-262 [Jmol] [rasmolscript] [script source]     - Domain d1d0na3, region A:263-383 [Jmol] [rasmolscript] [script source]     - Domain d1d0na1, region A:27-152 [Jmol] [rasmolscript] [script source]     - Domain d1d0na4, region A:384-532 [Jmol] [rasmolscript] [script source]     - Domain d1d0na5, region A:533-628 [Jmol] [rasmolscript] [script source]     - Domain d1d0na6, region A:629-755 [Jmol] [rasmolscript] [script source]     - Domain d1d0nb2, region B:153-262 [Jmol] [rasmolscript] [script source]     - Domain d1d0nb3, region B:263-383 [Jmol] [rasmolscript] [script source]     - Domain d1d0nb1, region B:27-152 [Jmol] [rasmolscript] [script source]     - Domain d1d0nb4, region B:384-532 [Jmol] [rasmolscript] [script source]     - Domain d1d0nb5, region B:533-628 [Jmol] [rasmolscript] [script source]     - Domain d1d0nb6, region B:629-755 [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1d0n] [1d0n_B] [1d0n_A] SWISS-PROT database: [Q28372] Domain organization of [GELS_HORSE] by SWISSPFAM Domain found in 1D0N: [GEL ] by SMART

Other resources with information on 1D0N

Community annotation for 1D0N at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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Images from IMB Jena Image Library of Biological Macromolecules.

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