1J0A	Lyase	date	Nov 12, 2002
title	Crystal Structure Analysis Of The Acc Deaminase Homologue
authors	A.Fujino, T.Ose, M.Honma, M.Yao, I.Tanaka
compound		source
Molecule: 1-Aminocyclopropane-1-Carboxylate Deaminase Chain: A, B, C Synonym: Ahp, Acc Deaminase Ec: 4.1.99.4 Engineered: Yes		Organism_scientific: Pyrococcus Horikoshii Organism_taxid: 70601 Strain: Ot3 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet22b
symmetry	Space Group: P 32 2 1	R_factor 0.201 R_Free 0.270
crystal cell	length a length b length c angle alpha angle beta angle gamma 122.340 122.340 115.031 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.50 Å
ligand	IPA, PLP, SO4	enzyme	Lyase E.C.4.1.99.4 BRENDA
related structures	by homologous chain: 1J0B
Gene Ontology	Chain Function Process Component A, C, B
Primary reference	Structural and enzymatic properties of 1-aminocyclopropane-1-carboxylate deaminase homologue from Pyrococcus horikoshii., Fujino A, Ose T, Yao M, Tokiwano T, Honma M, Watanabe N, Tanaka I, J Mol Biol 2004 Aug 20;341(4):999-1013. PMID:15328614

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (156 Kb) [Save to disk] Biological Unit Coordinates (1j0a.pdb1.gz) 103 Kb Biological Unit Coordinates (1j0a.pdb2.gz) 101 Kb Biological Unit Coordinates (1j0a.pdb3.gz) 299 Kb LPC: Ligand-Protein Contacts for 1J0A CSU: Contacts of Structural Units for 1J0A Likely Quarternary Molecular Structure file(s) for 1J0A Retrieve 1J0A in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1J0A from S2C, [Save to disk]

View 1J0A in 3D

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Visual 3D analysis of 1J0A

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1J0A, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1j0aa_, region A [Jmol] [rasmolscript] [script source]     - Domain d1j0ab_, region B [Jmol] [rasmolscript] [script source]     - Domain d1j0ac_, region C [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1j0a] [1j0a_A] [1j0a_C] [1j0a_B] SWISS-PROT database: [O57809] Domain organization of [1A1D_PYRHO] by SWISSPFAM

Other resources with information on 1J0A

Community annotation for 1J0A at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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