1QMD date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CA, ZN enzyme
related structures by homologous chain: 1GYG, 1KHO
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • toxin activity


    • Primary referenceCharacterisation of the calcium-binding C-terminal domain of Clostridium perfringens alpha-toxin., Naylor CE, Jepson M, Crane DT, Titball RW, Miller J, Basak AK, Bolgiano B, J Mol Biol 1999 Dec 3;294(3):757-70. PMID:10610794
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (133 Kb) [Save to disk]
  • Biological Unit Coordinates (1qmd.pdb1.gz) 65 Kb
  • Biological Unit Coordinates (1qmd.pdb2.gz) 65 Kb
  • LPC: Ligand-Protein Contacts for 1QMD
  • CSU: Contacts of Structural Units for 1QMD
  • Likely Quarternary Molecular Structure file(s) for 1QMD
  • Structure Factors (370 Kb)
  • Retrieve 1QMD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1QMD from S2C, [Save to disk]
  • Re-refined 1qmd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1QMD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1qmd] [1qmd_A] [1qmd_B]
  • SWISS-PROT database: [P0C216] [Q0TV31]
  • Domain found in 1QMD: [Zn_dep_PLPC ] by SMART

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