1RP1 Hydrolase date Apr 02, 1998
title Dog Pancreatic Lipase Related Protein 1
authors A.Roussel, C.Cambillau
compound source
Molecule: Pancreatic Lipase Related Protein 1
Chain: A
Organism_scientific: Canis Lupus Familiaris
Organism_common: Dog
Organism_taxid: 9615
Strain: Familiaris
Organ: Pancreas
Secretion: Pancreatic Juice
symmetry Space Group: C 2 2 21
R_factor 0.195 R_Free 0.256
length a length b length c angle alpha angle beta angle gamma
54.026 150.748 132.006 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.10 Å
ligand CA, NAG enzyme Hydrolase E.C. BRENDA
related structures by homologous chain: 1BU8, 1HPL

Primary referenceReactivation of the totally inactive pancreatic lipase RP1 by structure-predicted point mutations., Roussel A, de Caro J, Bezzine S, Gastinel L, de Caro A, Carriere F, Leydier S, Verger R, Cambillau C, Proteins 1998 Sep 1;32(4):523-31. PMID:9726421
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (79 Kb) [Save to disk]
  • Biological Unit Coordinates (1rp1.pdb1.gz) 75 Kb
  • LPC: Ligand-Protein Contacts for 1RP1
  • CSU: Contacts of Structural Units for 1RP1
  • Likely Quarternary Molecular Structure file(s) for 1RP1
  • Structure Factors (215 Kb)
  • Retrieve 1RP1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1RP1 from S2C, [Save to disk]
  • Re-refined 1rp1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1RP1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1RP1
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1RP1, from MSDmotif at EBI
  • Genome occurence of 1RP1's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1rp1_2, region 1-336 [Jmol] [rasmolscript] [script source]
        - Domain d1rp1_1, region 337-449 [Jmol] [rasmolscript] [script source]
  • Fold representative 1rp1 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1rp1_A] [1rp1]
  • SWISS-PROT database: [P06857]
  • Domain organization of [LIPR1_CANFA] by SWISSPFAM
  • Domain found in 1RP1: [LH2 ] by SMART
  • Other resources with information on 1RP1
  • Community annotation for 1RP1 at PDBWiki (http://pdbwiki.org)
  • LED, table of lipase structures from Lipase Engineering Database.
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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