1WUG Transferase date Dec 07, 2004
title Complex Structure Of Pcaf Bromodomain With Small Chemical Ligand Np1
authors L.Zeng, J.Li, M.Muller, S.Yan, S.Mujtaba, C.Pan, Z.Wang, M.M.Zhou
compound source
Molecule: Histone Acetylatransferase Pcaf
Chain: A
Fragment: Bromodomain
Synonym: P300cbp-Associated Factor, Pcaf, Histone Acetylase Pcaf;
Ec: 2.3.1.48
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Pcaf
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet14b
methodSolution NMR
ligand NP1 BindingDB enzyme Transferase E.C.2.3.1.48 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSelective small molecules blocking HIV-1 Tat and coactivator PCAF association., Zeng L, Li J, Muller M, Yan S, Mujtaba S, Pan C, Wang Z, Zhou MM, J Am Chem Soc 2005 Mar 2;127(8):2376-7. PMID:15724976
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (36 Kb) [Save to disk]
  • LPC: Ligand-Protein Contacts for 1WUG
  • CSU: Contacts of Structural Units for 1WUG
  • Retrieve 1WUG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1WUG from S2C, [Save to disk]
  • View 1WUG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1WUG
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1WUG, from MSDmotif at EBI
  • Fold representative 1wug from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1wug] [1wug_A]
  • SWISS-PROT database: [Q92831]
  • Domain organization of [KAT2B_HUMAN] by SWISSPFAM
  • Domain found in 1WUG: [BROMO ] by SMART
  • Other resources with information on 1WUG
  • Community annotation for 1WUG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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