1ZV4 Signaling Protein date Jun 01, 2005
title Structure Of The Regulator Of G-Protein Signaling 17 (Rgsz2)
authors G.A.Schoch, A.Jansson, J.M.Elkins, A.Haroniti, F.H.Niesen, G.Bunk W.H.Lee, A.P.Turnbull, X.Yang, M.Sundstrom, C.Arrowsmith, A.Edwa B.Marsden, O.Gileadi, L.Ball, F.Von Delft, D.A.Doyle, Structural Consortium (Sgc)
compound source
Molecule: Regulator Of G-Protein Signaling 17
Chain: X
Synonym: Rgs17
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Rgs17
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)-R3
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Plic-Sgc
symmetry Space Group: P 63 2 2
R_factor 0.228 R_Free 0.262
crystal
cell
length a length b length c angle alpha angle beta angle gamma
105.153 105.153 57.515 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.40 Å
Primary referenceStructural diversity in the RGS domain and its interaction with heterotrimeric G protein alpha-subunits., Soundararajan M, Willard FS, Kimple AJ, Turnbull AP, Ball LJ, Schoch GA, Gileadi C, Fedorov OY, Dowler EF, Higman VA, Hutsell SQ, Sundstrom M, Doyle DA, Siderovski DP, Proc Natl Acad Sci U S A. 2008 Apr 29;105(17):6457-62. Epub 2008 Apr 23. PMID:18434541
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (27 Kb) [Save to disk]
  • Biological Unit Coordinates (1zv4.pdb1.gz) 22 Kb
  • CSU: Contacts of Structural Units for 1ZV4
  • Likely Quarternary Molecular Structure file(s) for 1ZV4
  • Structure Factors (53 Kb)
  • Retrieve 1ZV4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ZV4 from S2C, [Save to disk]
  • Re-refined 1zv4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1ZV4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1ZV4
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1ZV4, from MSDmotif at EBI
  • Fold representative 1zv4 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1zv4] [1zv4_X]
  • SWISS-PROT database: [Q9UGC6]
  • Domain organization of [RGS17_HUMAN] by SWISSPFAM
  • Domain found in 1ZV4: [RGS ] by SMART
  • Alignments of the sequence of 1ZV4 with the sequences similar proteins can be viewed for 1ZV4's classification [RGS17_HUMAN] at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list.
  • A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification [RGS17_HUMAN] at ProtoMap. Click on the Cluster number.
  • Other resources with information on 1ZV4
  • Community annotation for 1ZV4 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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