1IS0 Crystal Structure of a Complex of the Src SH2 Domain with Conformationally Constrained Peptide Inhibitor date
authors Davidson, J.P., Lubman, O., Rose, T., Waksman, G., Martin, S.F.
compound source
symmetry
R_factor
R_Free 0.2720000
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.90
ligand AY0 enzyme
related structures by homologous chain: 1NZL, 1Y57
Primary referenceCalorimetric and structural studies of 1,2,3-trisubstituted cyclopropanes as conformationally constrained peptide inhibitors of Src SH2 domain binding., Davidson JP, Lubman O, Rose T, Waksman G, Martin SF, J Am Chem Soc 2002 Jan 16;124(2):205-15. PMID:11782172
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (42 Kb) [Save to disk]
  • Biological Unit Coordinates (1is0.pdb1.gz) 20 Kb
  • Biological Unit Coordinates (1is0.pdb2.gz) 20 Kb
  • LPC: Ligand-Protein Contacts for 1IS0
  • CSU: Contacts of Structural Units for 1IS0
  • Likely Quarternary Molecular Structure file(s) for 1IS0
  • Structure Factors (344 Kb)
  • Retrieve 1IS0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1IS0 from S2C, [Save to disk]
  • Re-refined 1is0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1IS0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1IS0
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1IS0, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1is0a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1is0b_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1is0_D] [1is0_B] [1is0] [1is0_A] [1is0_C]
  • SWISS-PROT database: [P00524]
  • Domain organization of [SRC_RSVSA] by SWISSPFAM
  • Domain found in 1IS0: [SH2 ] by SMART
  • Other resources with information on 1IS0
  • Community annotation for 1IS0 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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