2G1T	Transferase	date	Feb 14, 2006
title	A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
authors	N.M.Levinson, O.Kuchment
compound		source
Molecule: Proto-Oncogene Tyrosine-Protein Kinase Abl1 Chain: A, B, C, D Fragment: Kinase Domain Synonym: P150, C- Abl, Abelson Murine Leukemia Viral Oncoge 1; Ec: 2.7.1.112 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Abl1, Abl, Jtk7 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Atp-Peptide Conjugate Chain: E, F, G, H Engineered: Yes		Synthetic: Yes Other_details: Solid Phase Peptide Synthesis
symmetry	Space Group: P 1 21 1	R_factor 0.219 R_Free 0.244
crystal cell	length a length b length c angle alpha angle beta angle gamma 62.586 78.440 141.609 90.00 90.11 90.00
method	X-Ray Diffraction	resolution	1.80 Å
ligand	112, MG	enzyme	Transferase E.C.2.7.1.112 BRENDA
Gene Ontology	Chain Function Process Component A, D, C, B
Primary reference	A Src-like inactive conformation in the abl tyrosine kinase domain., Levinson NM, Kuchment O, Shen K, Young MA, Koldobskiy M, Karplus M, Cole PA, Kuriyan J, PLoS Biol. 2006 May;4(5):e144. Epub 2006 May 2. PMID:16640460

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (209 Kb) [Save to disk] Biological Unit Coordinates (2g1t.pdb1.gz) 54 Kb Biological Unit Coordinates (2g1t.pdb2.gz) 54 Kb Biological Unit Coordinates (2g1t.pdb3.gz) 52 Kb Biological Unit Coordinates (2g1t.pdb4.gz) 54 Kb LPC: Ligand-Protein Contacts for 2G1T CSU: Contacts of Structural Units for 2G1T Likely Quarternary Molecular Structure file(s) for 2G1T Structure Factors (916 Kb) Retrieve 2G1T in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2G1T from S2C, [Save to disk] Re-refined 2g1t structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2G1T in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2G1T

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2G1T, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2g1t_B] [2g1t_C] [2g1t_A] [2g1t] [2g1t_F] [2g1t_E] [2g1t_G] [2g1t_H] [2g1t_D] SWISS-PROT database: [P00519] Domain organization of [ABL1_HUMAN] by SWISSPFAM Domain found in 2G1T: [TyrKc ] by SMART

Other resources with information on 2G1T

Community annotation for 2G1T at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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