2HRP	Complex (Immunoglobulin Peptide)	date	Dec 27, 1996
title	Antigen-Antibody Complex
authors	J.Lescar, G.A.Bentley
compound		source
Molecule: Monoclonal Antibody F11.2.32 Chain: L, M Fragment: Fab Fragment Synonym: Immunoglobulin, Igg1		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Strain: Balbc Cell_line: Hybridoma
Molecule: Monoclonal Antibody F11.2.32 Chain: H, N Fragment: Fab Fragment Synonym: Immunoglobulin, Igg1		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Strain: Balbc Cell_line: Hybridoma
Molecule: Hiv-1 Protease Peptide Chain: P, Q Fragment: Residues 36 - 46 Engineered: Yes
symmetry	Space Group: P 21 21 21	R_factor 0.198 R_Free 0.289
crystal cell	length a length b length c angle alpha angle beta angle gamma 82.300 96.310 105.860 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.20 Å
related structures	by homologous chain: 1KCU, 2CK0, 2PCP
Primary reference	Three-dimensional structure of an Fab-peptide complex: structural basis of HIV-1 protease inhibition by a monoclonal antibody., Lescar J, Stouracova R, Riottot MM, Chitarra V, Brynda J, Fabry M, Horejsi M, Sedlacek J, Bentley GA, J Mol Biol 1997 Apr 18;267(5):1207-22. PMID:9150407

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (149 Kb) [Save to disk] Biological Unit Coordinates (2hrp.pdb1.gz) 74 Kb Biological Unit Coordinates (2hrp.pdb2.gz) 74 Kb Biological Unit Coordinates (2hrp.pdb3.gz) 144 Kb CSU: Contacts of Structural Units for 2HRP Likely Quarternary Molecular Structure file(s) for 2HRP Structure Factors (385 Kb) Retrieve 2HRP in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2HRP from S2C, [Save to disk] Re-refined 2hrp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2HRP in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2HRP

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2HRP, from MSDmotif at EBI Genome occurence of 2HRP's fold from GeneCensus Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d2hrph1, region H:1-113 [Jmol] [rasmolscript] [script source]     - Domain d2hrph2, region H:114-214 [Jmol] [rasmolscript] [script source]     - Domain d2hrpl1, region L:1-107 [Jmol] [rasmolscript] [script source]     - Domain d2hrpl2, region L:108-211 [Jmol] [rasmolscript] [script source]     - Domain d2hrpm1, region M:1-107 [Jmol] [rasmolscript] [script source]     - Domain d2hrpm2, region M:108-214 [Jmol] [rasmolscript] [script source]     - Domain d2hrpn1, region N:1-113 [Jmol] [rasmolscript] [script source]     - Domain d2hrpn2, region N:114-212 [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2hrp_Q] [2hrp_L] [2hrp_P] [2hrp_H] [2hrp_N] [2hrp] [2hrp_M] SWISS-PROT database: [P01837] Domain organization of [IGKC_MOUSE] by SWISSPFAM Domains found in 2HRP: [IG_like] [IGv ] by SMART

Other resources with information on 2HRP

Community annotation for 2HRP at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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