2VYV date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 1GP, CSD, CSX, FMT, NAD enzyme
Gene
Ontology
ChainFunctionProcessComponent
C, A, B


D


Primary referenceStructure of Insoluble Rat Sperm Glyceraldehyde-3-phosphate Dehydrogenase (GAPDH) via Heterotetramer Formation with Escherichia coli GAPDH Reveals Target for Contraceptive Design., Frayne J, Taylor A, Cameron G, Hadfield AT, J Biol Chem. 2009 Aug 21;284(34):22703-12. Epub 2009 Jun 19. PMID:19542219
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (230 Kb) [Save to disk]
  • Biological Unit Coordinates (2vyv.pdb1.gz) 222 Kb
  • LPC: Ligand-Protein Contacts for 2VYV
  • CSU: Contacts of Structural Units for 2VYV
  • Likely Quarternary Molecular Structure file(s) for 2VYV
  • Structure Factors (675 Kb)
  • Retrieve 2VYV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2VYV from S2C, [Save to disk]
  • Re-refined 2vyv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2VYV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2vyv] [2vyv_A] [2vyv_B] [2vyv_C] [2vyv_D]
  • SWISS-PROT database: [P0A9B2] [Q9ESV6]
  • Domain found in 2VYV: [Gp_dh_N ] by SMART

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