OCA Atlas for 3GP3

3GP3

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

PG4, PO3, SEP

enzyme

Gene
Ontology

Chain	Function	Process	Component
C, D, B, A

Primary reference

An ensemble of structures of Burkholderia pseudomallei 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase., Davies DR, Staker BL, Abendroth JA, Edwards TE, Hartley R, Leonard J, Kim H, Rychel AL, Hewitt SN, Myler PJ, Stewart LJ, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2011 Sep 1;67(Pt, 9):1044-50. Epub 2011 Aug 13. PMID:21904048

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (169 Kb) [Save to disk]

Biological Unit Coordinates (3gp3.pdb1.gz) 43 Kb

Biological Unit Coordinates (3gp3.pdb2.gz) 43 Kb

Biological Unit Coordinates (3gp3.pdb3.gz) 44 Kb

Biological Unit Coordinates (3gp3.pdb4.gz) 43 Kb

LPC: Ligand-Protein Contacts for 3GP3

CSU: Contacts of Structural Units for 3GP3

Likely Quarternary Molecular Structure file(s) for 3GP3

Structure Factors (2192 Kb)

Retrieve 3GP3 in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 3GP3 from S2C, [Save to disk]

Re-refined 3gp3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3GP3 in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3gp3] [3gp3_A] [3gp3_B] [3gp3_C] [3gp3_D]

SWISS-PROT database: [Q3JWH7]

Domain found in 3GP3: [PGAM ] by SMART

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