3GWX MOLECULAR RECOGNITION OF FATTY ACIDS BY PEROXISOME PROLIFERATOR-ACTIVATED RECEPTORS date
authors Xu, H.E., Lambert, M.H., Montana, V.G., Parks, D.J., Blanchard, S.G., Brown, P.J., Sternbach, D.D., Lehmann, J.M., Wisely, G.B., Willson, T.M., Kliewer, S.A., Milburn, M.V.
compound source
symmetry
R_factor
R_Free 0.3010000
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.40
ligand EPA enzyme
related structures by homologous chain: 1KNU, 1RDT
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceMolecular recognition of fatty acids by peroxisome proliferator-activated receptors., Xu HE, Lambert MH, Montana VG, Parks DJ, Blanchard SG, Brown PJ, Sternbach DD, Lehmann JM, Wisely GB, Willson TM, Kliewer SA, Milburn MV, Mol Cell 1999 Mar;3(3):397-403. PMID:10198642
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (97 Kb) [Save to disk]
  • Biological Unit Coordinates (3gwx.pdb1.gz) 92 Kb
  • LPC: Ligand-Protein Contacts for 3GWX
  • CSU: Contacts of Structural Units for 3GWX
  • Likely Quarternary Molecular Structure file(s) for 3GWX
  • Structure Factors (262 Kb)
  • Retrieve 3GWX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3GWX from S2C, [Save to disk]
  • Re-refined 3gwx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3GWX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3GWX
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3GWX, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d3gwxa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d3gwxb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3gwx_A] [3gwx_B] [3gwx]
  • SWISS-PROT database: [Q03181]
  • Domain organization of [PPARD_HUMAN] by SWISSPFAM
  • Domain found in 3GWX: [HOLI ] by SMART
    • Other resources with information on 3GWX
  • Community annotation for 3GWX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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