4TRA RESTRAINED REFINEMENT OF TWO CRYSTALLINE FORMS OF YEAST ASPARTIC ACID AND PHENYLALANINE TRANSFER RNA CRYSTALS date
authors Westhof, E., Dumas, P., Moras, D.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.00
ligand 1MA, 2MG, 5MC, 5MU, 7MG, H2U, M2G, MG, OMC, OMG, PSU, YG enzyme
Primary referenceRestrained refinement of two crystalline forms of yeast aspartic acid and phenylalanine transfer RNA crystals., Westhof E, Dumas P, Moras D, Acta Crystallogr A 1988 Mar 1;44 ( Pt 2):112-23. PMID:3272146
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (42 Kb) [Save to disk]
  • Biological Unit Coordinates (4tra.pdb1.gz) 36 Kb
  • LPC: Ligand-Protein Contacts for 4TRA
  • CSU: Contacts of Structural Units for 4TRA
  • Likely Quarternary Molecular Structure file(s) for 4TRA
  • Retrieve 4TRA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4TRA from S2C, [Save to disk]
  • View 4TRA in 3D
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  • Visual 3D analysis of 4TRA
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4TRA, from MSDmotif at EBI
  • Structure summary from SCOR (Structural Classification of RNA)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4tra] [4tra_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4TRA
  • Community annotation for 4TRA at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 4TRA from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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