OCA Atlas for 5EJL

5EJL

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

C2E, EDO, SO4

enzyme

Gene

AB187 ; ABY63 ; KPOL2 ; KPST15NDM1 ; PMK1 ; SE02 ; SK98 ; SL05 ; SL19 ; SL24 ; SL48 ; SL56 ; SL57 ; SL69 ; SL71 ; SL72 ; SL84 ; SL85 ; SM12 ; SM17 ; SM19 ; SM22 ; SM40 ; SM53 ; SM56 ; SM59 ; SM60 ; SM61 ; SM63 ; SM64 ; SM65 ; SM67 ; SM68 ; SM69 ; SM70 ; SM76 ; SM78 ; SM80 ; SM81 ; SM82 ; SM83 ; SM84 ; SM86 ; SM88 ; SM90 ; SM91 ; SM92 ; SM94 ; SM95 ; SM96 ; SM97 ; SM98 ; SM99 ; SN02

Gene
Ontology

Chain	Function	Process	Component
A

Primary reference

The PilZ domain of MrkH represents a novel DNA binding motif., Wang F, He Q, Su K, Gao F, Huang Y, Lin Z, Zhu D, Gu L, Protein Cell. 2016 Oct;7(10):766-772. PMID:27650952

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk]

Biological Unit Coordinates (5ejl.pdb1.gz) 44 Kb

Biological Unit Coordinates (5ejl.pdb2.gz) 85 Kb

LPC: Ligand-Protein Contacts for 5EJL

CSU: Contacts of Structural Units for 5EJL

Structure Factors (429 Kb)

Retrieve 5EJL in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 5EJL from S2C, [Save to disk]

Re-refined 5ejl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5EJL in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5ejl] [5ejl_A]

SWISS-PROT database:

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]