5FDQ		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	60A, AKR, BOG, COH, MAN, NAG	enzyme
Gene Ontology	Chain Function Process Component A, B peroxidase activity
Primary reference	Crystal Structure of Aspirin-Acetylated Human Cyclooxygenase-2: Insight into the Formation of Products with Reversed Stereochemistry., Lucido MJ, Orlando BJ, Vecchio AJ, Malkowski MG, Biochemistry. 2016 Mar 1;55(8):1226-38. doi: 10.1021/acs.biochem.5b01378. Epub, 2016 Feb 19. PMID:26859324

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (393 Kb) [Save to disk] Biological Unit Coordinates (5fdq.pdb1.gz) 384 Kb LPC: Ligand-Protein Contacts for 5FDQ CSU: Contacts of Structural Units for 5FDQ Structure Factors (2301 Kb) Retrieve 5FDQ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5FDQ from S2C, [Save to disk] Re-refined 5fdq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5FDQ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5fdq] [5fdq_A] [5fdq_B] SWISS-PROT database: Domain found in 5FDQ: [EGF ] by SMART

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---