5IDM date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ANP, C2E, MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCyclic di-GMP mediates a histidine kinase/phosphatase switch by noncovalent domain cross-linking., Dubey BN, Lori C, Ozaki S, Fucile G, Plaza-Menacho I, Jenal U, Schirmer T, Sci Adv. 2016 Sep 16;2(9):e1600823. doi: 10.1126/sciadv.1600823. eCollection 2016, Sep. PMID:27652341
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (72 Kb) [Save to disk]
  • Biological Unit Coordinates (5idm.pdb1.gz) 34 Kb
  • Biological Unit Coordinates (5idm.pdb2.gz) 33 Kb
  • LPC: Ligand-Protein Contacts for 5IDM
  • CSU: Contacts of Structural Units for 5IDM
  • Structure Factors (1911 Kb)
  • Retrieve 5IDM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5IDM from S2C, [Save to disk]
  • Re-refined 5idm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5IDM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5idm] [5idm_A] [5idm_B]
  • SWISS-PROT database:
  • Domain found in 5IDM: [HATPase_c ] by SMART

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