5MR6 Oxidoreductase date Dec 21, 2016
title Xiaf From Streptomyces Sp. In Complex With Fadh2 And Glycero
authors S.Kugel, M.Baunach, P.Baer, M.Ishida-Ito, S.Sundaram, Z.Xu, M.Grol C.Hertweck
compound source
Molecule: Xiaf Protein
Chain: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R V, W, X;
Engineered: Yes
Organism_scientific: Streptomyces Sp.
Organism_taxid: 1931
Gene: Xiaf
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1
R_factor 0.198 R_Free 0.229
length a length b length c angle alpha angle beta angle gamma
166.930 167.090 200.940 89.96 90.18 119.82
method X-Ray Diffractionresolution 2.40 Å
ligand FAD, GOL enzyme
S, F, T, N, K, E, V, Q, M, C, L, A, J, O, W, X, P, B, H, D, R, I, G, U

Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (3171 Kb) [Save to disk]
  • Biological Unit Coordinates (5mr6.pdb1.gz) 541 Kb
  • Biological Unit Coordinates (5mr6.pdb2.gz) 538 Kb
  • Biological Unit Coordinates (5mr6.pdb3.gz) 538 Kb
  • Biological Unit Coordinates (5mr6.pdb4.gz) 540 Kb
  • Biological Unit Coordinates (5mr6.pdb5.gz) 537 Kb
  • Biological Unit Coordinates (5mr6.pdb6.gz) 542 Kb
  • LPC: Ligand-Protein Contacts for 5MR6
  • CSU: Contacts of Structural Units for 5MR6
  • Structure Factors (20386 Kb)
  • Retrieve 5MR6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5MR6 from S2C, [Save to disk]
  • Re-refined 5mr6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5MR6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5MR6
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5mr6_I] [5mr6_A] [5mr6_D] [5mr6_E] [5mr6_H] [5mr6_K] [5mr6_C] [5mr6_L] [5mr6_X] [5mr6_S] [5mr6_V] [5mr6_N] [5mr6_J] [5mr6_M] [5mr6_T] [5mr6_P] [5mr6_W] [5mr6_B] [5mr6_F] [5mr6_U] [5mr6_G] [5mr6_O] [5mr6_R] [5mr6_Q]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5MR6
  • Community annotation for 5MR6 at PDBWiki (http://pdbwiki.org)

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