5NVL	Translation	date	May 04, 2017
title	Crystal Structure Of The Human 4ehp-Gigyf2 Complex
authors	D.Peter, E.Valkov
compound		source
Molecule: Eukaryotic Translation Initiation Factor 4e Type Chain: A, C Synonym: Eif4e Type 2,Eukaryotic Translation Initiation Fac Homologous Protein,Eukaryotic Translation Initiation Factor 3,Eif4e-Like Protein 4e-Lp,Mrna Cap-Binding Protein 4ehp,H4 Cap-Binding Protein Type 3; Engineered: Yes Other_details: The First 5 Residues Of The Coordinate Seque Chain A And The First Residue Of The Coordinate Sequence Of Belong To The Expression Tag;		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Eif4e2, Eif4el3 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_variant: Star
Molecule: Grb10-Interacting Gyf Protein 2 Chain: B, D Synonym: Perq Amino Acid-Rich With Gyf Domain-Containing Pr Trinucleotide Repeat-Containing Gene 15 Protein; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Gigyf2, Kiaa0642, Perq2, Tnrc15 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_variant: Star
symmetry	Space Group: P 41 21 2	R_factor 0.205 R_Free 0.242
crystal cell	length a length b length c angle alpha angle beta angle gamma 82.550 82.550 148.490 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.30 Å
Gene Ontology	Chain Function Process Component A, C
Primary reference	GIGYF1/2 proteins use auxiliary sequences to selectively bind to 4EHP and repress target mRNA expression., Peter D, Weber R, Sandmeir F, Wohlbold L, Helms S, Bawankar P, Valkov E, Igreja C, Izaurralde E, Genes Dev. 2017 Jun 1;31(11):1147-1161. doi: 10.1101/gad.299420.117. Epub 2017, Jul 11. PMID:28698298

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (234 Kb) [Save to disk] Biological Unit Coordinates (5nvl.pdb1.gz) 117 Kb Biological Unit Coordinates (5nvl.pdb2.gz) 113 Kb CSU: Contacts of Structural Units for 5NVL Structure Factors (214 Kb) Retrieve 5NVL in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5NVL from S2C, [Save to disk] Re-refined 5nvl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5NVL in 3D

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Visual 3D analysis of 5NVL

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5nvl_C] [5nvl_D] [5nvl_A] [5nvl_B] SWISS-PROT database: Domain organization of by SWISSPFAM

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