6DMY date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CA, NAG, SER, Y01, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceStructural basis for the recognition of Sonic Hedgehog by human Patched1., Gong X, Qian H, Cao P, Zhao X, Zhou Q, Lei J, Yan N, Science. 2018 Jun 28. pii: science.aas8935. doi: 10.1126/science.aas8935. PMID:29954986
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (192 Kb) [Save to disk]
  • Biological Unit Coordinates (6dmy.pdb1.gz) 184 Kb
  • LPC: Ligand-Protein Contacts for 6DMY
  • CSU: Contacts of Structural Units for 6DMY
  • Retrieve 6DMY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6DMY from S2C, [Save to disk]
  • View 6DMY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6dmy_A] [6dmy_B]
  • SWISS-PROT database:

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