2DAZ Protein Binding date Dec 14, 2005
title Solution Structure Of The 7th Pdz Domain Of Inad-Like Protein
authors K.Inoue, T.Nagashima, K.Izumi, F.Hayashi, S.Yokoyama, Riken Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Inad-Like Protein
Chain: A
Fragment: Pdz Domain
Synonym: Inadl Protein, Hinadl, Pals1-Associated Tight Junction Protein, Protein Associated To Tight Junctions;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Inadl, Patj
Expression_system: Cell Free Synthesis
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P050302-33
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (624 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 2DAZ
  • Retrieve 2DAZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2DAZ from S2C, [Save to disk]
  • View 2DAZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2DAZ
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2DAZ, from MSDmotif at EBI
  • Fold representative 2daz from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2daz_A] [2daz]
  • SWISS-PROT database: [Q8NI35]
  • Domain organization of [INADL_HUMAN] by SWISSPFAM
  • Domain found in 2DAZ: [PDZ ] by SMART
  • Other resources with information on 2DAZ
  • Community annotation for 2DAZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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