2EIM date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CDL, CHD, CU, CUA, DMU, FME, HEA, MG, NA, PEK, PGV, PSC, SAC, TGL, TPO, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, N


B, O
  • cytochrome-c oxidase activit...


    • D, Q


    F, S


    G, T


    H, U


    K, X


    L, Y


    P, C
  • cytochrome-c oxidase activit...
  • oxidoreduction-driven active...


    • R, E


    V, I
  • cytochrome-c oxidase activit...


    • W, J


    Z, M


    Primary referenceA histidine residue acting as a controlling site for dioxygen reduction and proton pumping by cytochrome c oxidase., Muramoto K, Hirata K, Shinzawa-Itoh K, Yoko-o S, Yamashita E, Aoyama H, Tsukihara T, Yoshikawa S, Proc Natl Acad Sci U S A. 2007 May 8;104(19):7881-6. Epub 2007 Apr 30. PMID:17470809
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (663 Kb) [Save to disk]
  • Biological Unit Coordinates (2eim.pdb1.gz) 640 Kb
  • LPC: Ligand-Protein Contacts for 2EIM
  • CSU: Contacts of Structural Units for 2EIM
  • Likely Quarternary Molecular Structure file(s) for 2EIM
  • Retrieve 2EIM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2EIM from S2C, [Save to disk]
    • View 2EIM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2eim] [2eim_A] [2eim_B] [2eim_C] [2eim_D] [2eim_E] [2eim_F] [2eim_G] [2eim_H] [2eim_I] [2eim_J] [2eim_K] [2eim_L] [2eim_M] [2eim_N] [2eim_O] [2eim_P] [2eim_Q] [2eim_R] [2eim_S] [2eim_T] [2eim_U] [2eim_V] [2eim_W] [2eim_X] [2eim_Y] [2eim_Z]
  • SWISS-PROT database: [P00396] [P68530] [P00415] [P00423] [P00426] [P00428] [P04038] [P13183] [P00430] [P10175] [P07471] [P00429] [P07470]
  • Belongs to the proton-translocating cytochrome oxidase (cox) superfamily according to TCDB.

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