OCA Atlas for 2V5H

2V5H

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

CL, GOL, NA, NLG

enzyme

Gene
Ontology

Chain	Function	Process	Component
C, B, F, E, A, D
J, G, H, I, K, L	enzyme regulator activity

Primary reference

The crystal structure of the complex of PII and acetylglutamate kinase reveals how PII controls the storage of nitrogen as arginine., Llacer JL, Contreras A, Forchhammer K, Marco-Marin C, Gil-Ortiz F, Maldonado R, Fita I, Rubio V, Proc Natl Acad Sci U S A. 2007 Nov 6;104(45):17644-9. Epub 2007 Oct 24. PMID:17959776

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (366 Kb) [Save to disk]

Biological Unit Coordinates (2v5h.pdb1.gz) 353 Kb

LPC: Ligand-Protein Contacts for 2V5H

CSU: Contacts of Structural Units for 2V5H

Likely Quarternary Molecular Structure file(s) for 2V5H

Structure Factors (488 Kb)

Retrieve 2V5H in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 2V5H from S2C, [Save to disk]

Re-refined 2v5h structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2V5H in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2v5h] [2v5h_A] [2v5h_B] [2v5h_C] [2v5h_D] [2v5h_E] [2v5h_F] [2v5h_G] [2v5h_H] [2v5h_I] [2v5h_J] [2v5h_K] [2v5h_L]

SWISS-PROT database: [Q6V1L5] [P0A3F4]

Domain found in 2V5H: [P-II ] by SMART

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