3FIA Protein Binding date Dec 11, 2008
title Crystal Structure Of The Eh 1 Domain From Human Intersectin- Northeast Structural Genomics Consortium Target Hr3646e.
authors S.M.Vorobiev, Y.Chen, J.Seetharaman, C.Devices, L.Zhao, E.L.Foote C.Ciccosanti, L.Mao, R.Xiao, T.B.Acton, G.T.Montelione, J.F.Hunt Northeast Structural Genomics Consortium (Nesg)
compound source
Molecule: Intersectin-1
Chain: A
Fragment: Residues 1-111
Synonym: Sh3 Domain-Containing Protein 1a, Sh3p17
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Itsn, Itsn1, Sh3d1a
Expression_system: Escherichia Coli
Expression_system_strain: Bl21 (De3) +Magic
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet 14-15c
symmetry Space Group: C 1 2 1
R_factor 0.160 R_Free 0.176
crystal
cell
length a length b length c angle alpha angle beta angle gamma
94.848 32.021 33.287 90.00 106.45 90.00
method X-Ray Diffractionresolution 1.45 Å
ligand CA, MSE, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (42 Kb) [Save to disk]
  • Biological Unit Coordinates (3fia.pdb1.gz) 38 Kb
  • LPC: Ligand-Protein Contacts for 3FIA
  • CSU: Contacts of Structural Units for 3FIA
  • Likely Quarternary Molecular Structure file(s) for 3FIA
  • Structure Factors (290 Kb)
  • Retrieve 3FIA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3FIA from S2C, [Save to disk]
  • Re-refined 3fia structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3FIA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3FIA
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3FIA, from MSDmotif at EBI
  • Fold representative 3fia from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3fia_A] [3fia]
  • SWISS-PROT database: [Q15811]
  • Domain organization of [ITSN1_HUMAN] by SWISSPFAM
  • Domain found in 3FIA: [EH ] by SMART
  • Other resources with information on 3FIA
  • Community annotation for 3FIA at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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