3VIP date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CL, GOI, GOL, NA, ONB enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceHigh-resolution structures of Neotermes koshunensis beta-glucosidase mutants provide insights into the catalytic mechanism and the synthesis of glucoconjugates., Jeng WY, Wang NC, Lin CT, Chang WJ, Liu CI, Wang AH, Acta Crystallogr D Biol Crystallogr. 2012 Jul;68(Pt 7):829-38. doi:, 10.1107/S0907444912013224. Epub 2012 Jun 19. PMID:22751668
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (186 Kb) [Save to disk]
  • Biological Unit Coordinates (3vip.pdb1.gz) 181 Kb
  • Biological Unit Coordinates (3vip.pdb2.gz) 359 Kb
  • LPC: Ligand-Protein Contacts for 3VIP
  • CSU: Contacts of Structural Units for 3VIP
  • Structure Factors (1816 Kb)
  • Retrieve 3VIP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3VIP from S2C, [Save to disk]
  • Re-refined 3vip structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3VIP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3vip] [3vip_A]
  • SWISS-PROT database:

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