4FAO Specificity and Structure of a high affinity Activin-like 1 (ALK1) signaling complex date 2012-05-22
authors Townson, S.A., Martinez-Hackert, E., Greppi, C., Lowden, P., Sako, D., Liu, J., Ucran, J.A., Liharska, K., Underwood, K.W., Seehra, J., Kumar, R., Grinberg, A.V.
compound source
symmetry
R_factor
R_Free 0.2614
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.36
ligand NA, NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
K, E, k, e, W, F, Q, L, f, X, l, R


S, a, T, N, g, B, H, b, G, M, h, A


d, j, J, c, D, I, U, V, C, i, O, P


Primary referenceSpecificity and structure of a high affinity activin receptor-like kinase 1 (ALK1) signaling complex., Townson SA, Martinez-Hackert E, Greppi C, Lowden P, Sako D, Liu J, Ucran JA, Liharska K, Underwood KW, Seehra J, Kumar R, Grinberg AV, J Biol Chem. 2012 Jun 20. PMID:22718755
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1082 Kb) [Save to disk]
  • Biological Unit Coordinates (4fao.pdb1.gz) 187 Kb
  • Biological Unit Coordinates (4fao.pdb2.gz) 185 Kb
  • Biological Unit Coordinates (4fao.pdb3.gz) 186 Kb
  • Biological Unit Coordinates (4fao.pdb4.gz) 186 Kb
  • Biological Unit Coordinates (4fao.pdb5.gz) 187 Kb
  • Biological Unit Coordinates (4fao.pdb6.gz) 186 Kb
  • LPC: Ligand-Protein Contacts for 4FAO
  • CSU: Contacts of Structural Units for 4FAO
  • Structure Factors (540 Kb)
  • Retrieve 4FAO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4FAO from S2C, [Save to disk]
  • Re-refined 4fao structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4FAO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4FAO
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4FAO, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4fao] [4fao_I] [4fao_O] [4fao_i] [4fao_l] [4fao_b] [4fao_e] [4fao_G] [4fao_N] [4fao_A] [4fao_S] [4fao_f] [4fao_c] [4fao_k] [4fao_K] [4fao_B] [4fao_E] [4fao_j] [4fao_F] [4fao_M] [4fao_g] [4fao_U] [4fao_h] [4fao_d] [4fao_C] [4fao_R] [4fao_W] [4fao_D] [4fao_J] [4fao_a] [4fao_X] [4fao_L] [4fao_Q] [4fao_V] [4fao_H] [4fao_P] [4fao_T]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4FAO: [TGFB ] by SMART
    • Other resources with information on 4FAO
  • Community annotation for 4FAO at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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