5B3S date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CDL, CHD, CMO, CU, CUA, DMU, EDO, FME, HEA, MG, NA, PEK, PGV, PO4, PSC, SAC, TGL, TPO, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, O
  • cytochrome-c oxidase activit...


  • C, P
  • cytochrome-c oxidase activit...
  • oxidoreduction-driven active...


  • G, T


    H, U


    L, Y


    N, A


    Q, D


    R, E


    S, F


    V, I
  • cytochrome-c oxidase activit...


  • W, J


    X, K


    Z, M


    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1298 Kb) [Save to disk]
  • Biological Unit Coordinates (5b3s.pdb1.gz) 638 Kb
  • Biological Unit Coordinates (5b3s.pdb2.gz) 640 Kb
  • LPC: Ligand-Protein Contacts for 5B3S
  • CSU: Contacts of Structural Units for 5B3S
  • Structure Factors (6112 Kb)
  • Retrieve 5B3S in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5B3S from S2C, [Save to disk]
  • Re-refined 5b3s structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5B3S in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5b3s] [5b3s_A] [5b3s_B] [5b3s_C] [5b3s_D] [5b3s_E] [5b3s_F] [5b3s_G] [5b3s_H] [5b3s_I] [5b3s_J] [5b3s_K] [5b3s_L] [5b3s_M] [5b3s_N] [5b3s_O] [5b3s_P] [5b3s_Q] [5b3s_R] [5b3s_S] [5b3s_T] [5b3s_U] [5b3s_V] [5b3s_W] [5b3s_X] [5b3s_Y] [5b3s_Z]
  • SWISS-PROT database:

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