5GJP date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand GOL, MG, N2P, NA, PGE, PLP enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal Structure and Pyridoxal 5-Phosphate Binding Property of Lysine Decarboxylase from Selenomonas ruminantium., Sagong HY, Son HF, Kim S, Kim YH, Kim IK, Kim KJ, PLoS One. 2016 Nov 18;11(11):e0166667. doi: 10.1371/journal.pone.0166667., eCollection 2016. PMID:27861532
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (67 Kb) [Save to disk]
  • Biological Unit Coordinates (5gjp.pdb1.gz) 121 Kb
  • LPC: Ligand-Protein Contacts for 5GJP
  • CSU: Contacts of Structural Units for 5GJP
  • Structure Factors (457 Kb)
  • Retrieve 5GJP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5GJP from S2C, [Save to disk]
  • Re-refined 5gjp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5GJP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5gjp] [5gjp_A]
  • SWISS-PROT database:

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