2KBX Cell Adhesion date Dec 10, 2008
title Solution Structure Of Ilk-Pinch Complex
authors J.Qin
compound source
Molecule: Integrin-Linked Protein Kinase
Chain: A
Fragment: N-Terminal Domain
Synonym: Ilk-1, Ilk-2, 59 Kda Serinethreonine-Protein Kina P59ilk;
Ec: 2.7.11.1
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ilk, Ilk1, Ilk2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector: Pgex

Molecule: Lim And Senescent Cell Antigen-Like-Containing Do Protein 1;
Chain: B
Fragment: Lim Zinc-Binding 1 Domain
Synonym: Particularly Interesting New Cys-His Protein 1, Pi Renal Carcinoma Antigen Ny-Ren-48;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Lims1, Pinch, Pinch1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector: Pgex
methodSolution NMR
ligand ZN enzyme Transferase E.C.2.7.11.1 BRENDA
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1337 Kb) [Save to disk]
  • Biological Unit Coordinates (2kbx.pdb1.gz) 66 Kb
  • LPC: Ligand-Protein Contacts for 2KBX
  • CSU: Contacts of Structural Units for 2KBX
  • Original NMR restraints for 2KBX from PDB
  • Retrieve 2KBX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2KBX from S2C, [Save to disk]
    • View 2KBX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2KBX
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2KBX, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2kbx_A] [2kbx] [2kbx_B]
  • SWISS-PROT database: [Q13418] [P48059]
  • Domain organization of [ILK_HUMAN] [LIMS1_HUMAN] by SWISSPFAM
  • Domains found in 2KBX: [ANK] [LIM ] by SMART
    • Other resources with information on 2KBX
  • Community annotation for 2KBX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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