3OFN	Hydrolase	date	Aug 15, 2010
title	Structure Of Four Mutant Forms Of Yeast F1 Atpase: Alpha-N67
authors	D.Arsenieva, J.Symersky, Y.Wang, V.Pagadala, D.M.Mueller
compound		source
Molecule: Atp Synthase Subunit Alpha Chain: A, B, C, J, K, L, S, T, U Fragment: Unp Residues 36-545 Ec: 3.6.3.14 Engineered: Yes Mutation: Yes		Organism_scientific: Saccharomyces Cerevisiae Organism_common: Brewer'S Yeast,Lager Beer Yeast,Yeast Organism_taxid: 4932 Gene: Atp1, Ybl0827, Ybl099w Expression_system: Saccharomyces Cerevisiae Expression_system_taxid: 4932
Molecule: Atp Synthase Subunit Beta Chain: D, E, F, M, N, O, V, W, X Fragment: Unp Residues 34-511 Ec: 3.6.3.14 Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae Organism_common: Brewer'S Yeast,Lager Beer Yeast,Yeast Organism_taxid: 4932 Gene: Atp2, J2041, Yjr121w Expression_system: Saccharomyces Cerevisiae Expression_system_taxid: 4932
Molecule: Atp Synthase Subunit Gamma Chain: G, P, Y Fragment: Unp Residues 34-311 Synonym: F-Atpase Gamma Subunit Ec: 3.6.3.14 Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae Organism_common: Brewer'S Yeast,Lager Beer Yeast,Yeast Organism_taxid: 4932 Gene: Atp3, Atp3a, Atp3b, Ybr039w, Ybr0408 Expression_system: Saccharomyces Cerevisiae Expression_system_taxid: 4932
Molecule: Atp Synthase Subunit Delta Chain: H, Q Fragment: Unp Residues 23-160 Synonym: F-Atpase Delta Subunit Ec: 3.6.3.14 Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae Organism_common: Brewer'S Yeast,Lager Beer Yeast,Yeast Organism_taxid: 4932 Gene: Atp16, D2935, Yd8119.03, Ydl004w Expression_system: Saccharomyces Cerevisiae Expression_system_taxid: 4932
Molecule: Atp Synthase Subunit Epsilon Chain: I, R Fragment: Unp Residues 2-62 Synonym: Atpase Subunit Epsilon Ec: 3.6.3.14 Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae Organism_common: Brewer'S Yeast,Lager Beer Yeast,Yeast Organism_taxid: 4932 Gene: Atp15, P0345, Ypl271w Expression_system: Saccharomyces Cerevisiae Expression_system_taxid: 4932
symmetry	Space Group: P 1 21 1	R_factor 0.210 R_Free 0.276
crystal cell	length a length b length c angle alpha angle beta angle gamma 112.019 290.619 188.465 90.00 102.34 90.00
method	X-Ray Diffraction	resolution	3.20 Å
ligand	ANP, MG	enzyme	Hydrolase E.C.3.6.3.14 BRENDA
Gene Ontology	Chain Function Process Component F, N, E, V, M, O, W, X, D Q, H R, I S, T, K, C, L, A, J, B, U Y, P, G
Primary reference	Crystal structures of mutant forms of the yeast F1 ATPase reveal two modes of uncoupling., Arsenieva D, Symersky J, Wang Y, Pagadala V, Mueller DM, J Biol Chem. 2010 Sep 14. PMID:20843806

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (2927 Kb) [Save to disk] Biological Unit Coordinates (3ofn.pdb1.gz) 1039 Kb Biological Unit Coordinates (3ofn.pdb2.gz) 1013 Kb Biological Unit Coordinates (3ofn.pdb3.gz) 888 Kb LPC: Ligand-Protein Contacts for 3OFN CSU: Contacts of Structural Units for 3OFN Structure Factors (1535 Kb) Retrieve 3OFN in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3OFN from S2C, [Save to disk] Re-refined 3ofn structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3OFN in 3D

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Visual 3D analysis of 3OFN

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3OFN, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3ofn_B] [3ofn_M] [3ofn_E] [3ofn] [3ofn_H] [3ofn_N] [3ofn_J] [3ofn_U] [3ofn_P] [3ofn_D] [3ofn_O] [3ofn_Y] [3ofn_F] [3ofn_Q] [3ofn_W] [3ofn_A] [3ofn_L] [3ofn_V] [3ofn_T] [3ofn_I] [3ofn_R] [3ofn_K] [3ofn_C] [3ofn_X] [3ofn_G] [3ofn_S] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3OFN: [AAA ] by SMART

Other resources with information on 3OFN

Community annotation for 3OFN at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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