1BO1 Transferase date Aug 02, 1998
title Phosphatidylinositol Phosphate Kinase Type II Beta
authors V.D.Rao, S.Misra, I.V.Boronenkov, R.A.Anderson, J.H.Hurley
compound source
Molecule: Protein (Phosphatidylinositol Phosphate Kinase Iibeta);
Chain: A, B
Synonym: Pipk
Ec: 2.7.1.68
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_cell_line: Bl21(De3)
Expression_system_vector_type: Bacterial
Expression_system_plasmid: Pet28b
Other_details: Human Enzyme Cloned Into E.Coli.
symmetry Space Group: C 2 2 21
R_factor 0.229 R_Free 0.299
crystal
cell
length a length b length c angle alpha angle beta angle gamma
109.915 182.403 106.472 90.00 90.00 90.00
method X-Ray Diffractionresolution 3.00 Å
ligand
enzyme Transferase E.C.2.7.1.68 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • phosphatidylinositol phospha...
  • 1-phosphatidylinositol-4-pho...
  • 1-phosphatidylinositol-5-pho...


  • Primary referenceStructure of type IIbeta phosphatidylinositol phosphate kinase: a protein kinase fold flattened for interfacial phosphorylation., Rao VD, Misra S, Boronenkov IV, Anderson RA, Hurley JH, Cell 1998 Sep 18;94(6):829-39. PMID:9753329
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (113 Kb) [Save to disk]
  • Biological Unit Coordinates (1bo1.pdb1.gz) 108 Kb
  • CSU: Contacts of Structural Units for 1BO1
  • Likely Quarternary Molecular Structure file(s) for 1BO1
  • Retrieve 1BO1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1BO1 from S2C, [Save to disk]
  • View 1BO1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1BO1
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1BO1, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1bo1a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1bo1b_, region B [Jmol] [rasmolscript] [script source]
  • Fold representative 1bo1 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1bo1] [1bo1_A] [1bo1_B]
  • SWISS-PROT database: [P78356]
  • Domain organization of [PI42B_HUMAN] by SWISSPFAM
  • Domain found in 1BO1: [PIPKc ] by SMART
  • Other resources with information on 1BO1
  • Community annotation for 1BO1 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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