2UX2 Immune System date Mar 26, 2007
title High Resolution Structure Of Human Cd59
authors K.J.Leath, S.Johnson, P.Roversi, B.P.Morgan, R.A.G.Smith, S.M.Lea
compound source
Molecule: Cd59 Glycoprotein
Chain: A, B, C
Fragment: Residues 26-102
Synonym: Membrane Attack Complex Inhibition Factor, Macif, Mac-Inhibitory Protein, Mac-Ip, Protectin, Mem43 Antigen, Membrane Inhibitor Of Reactive Lysis, Mirl, 20 Kda Homologous Restriction Factor, Hrf-20,Hrf20,1f5 Antigen;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Ut5600 De3
Expression_system_plasmid: Pet59-06
symmetry Space Group: P 61
R_factor 0.185 R_Free 0.223
crystal
cell
length a length b length c angle alpha angle beta angle gamma
60.840 60.840 107.530 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.80 Å
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceHigh-resolution structures of bacterially expressed soluble human CD59., Leath KJ, Johnson S, Roversi P, Hughes TR, Smith RA, Mackenzie L, Morgan BP, Lea SM, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 Aug 1;63(Pt, 8):648-52. Epub 2007 Jul 28. PMID:17671359
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (46 Kb) [Save to disk]
  • Biological Unit Coordinates (2ux2.pdb1.gz) 15 Kb
  • Biological Unit Coordinates (2ux2.pdb2.gz) 15 Kb
  • Biological Unit Coordinates (2ux2.pdb3.gz) 15 Kb
  • CSU: Contacts of Structural Units for 2UX2
  • Structure Factors (115 Kb)
  • Retrieve 2UX2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2UX2 from S2C, [Save to disk]
  • Re-refined 2ux2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2UX2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2UX2
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2UX2, from MSDmotif at EBI
  • Fold representative 2ux2 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ux2_C] [2ux2] [2ux2_B] [2ux2_A]
  • SWISS-PROT database: [P13987]
  • Domain organization of [CD59_HUMAN] by SWISSPFAM
  • Domain found in 2UX2: [LU ] by SMART
  • Other resources with information on 2UX2
  • Community annotation for 2UX2 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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