5C8L		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	GLC, GOL, PEG, SO4	enzyme
related structures	by homologous chain: 15C8, 1A14, 1DZB, 1G7L, 1H0D, 1LO0, 1NCA, 1P2C, 1XF4, 25C8, 35C8
Gene Ontology	Chain Function Process Component B, A
Primary reference	Structural and Enzymatic Characterization of a Nucleoside Diphosphate Sugar Hydrolase from Bdellovibrio bacteriovorus., de la Pena AH, Suarez A, Duong-Ly KC, Schoeffield AJ, Pizarro-Dupuy MA, Zarr M, Pineiro SA, Amzel LM, Gabelli SB, PLoS One. 2015 Nov 2;10(11):e0141716. doi: 10.1371/journal.pone.0141716., eCollection 2015. PMID:26524597

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (73 Kb) [Save to disk] Biological Unit Coordinates (5c8l.pdb1.gz) 68 Kb LPC: Ligand-Protein Contacts for 5C8L CSU: Contacts of Structural Units for 5C8L Structure Factors (365 Kb) Retrieve 5C8L in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5C8L from S2C, [Save to disk] Re-refined 5c8l structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5C8L in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5c8l] [5c8l_A] [5c8l_B] SWISS-PROT database:

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---